Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CTSDP07339 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CTSDP07339 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 AL031595.1-201ENST00000623969 4709 ntBASIC12.47□□□□□ -0.41
CTSDP07339 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 AC012617.1-204ENST00000586340 2305 ntBASIC12.47□□□□□ -0.41
CTSDP07339 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.47□□□□□ -0.41
CTSDP07339 AL080243.2-201ENST00000418783 582 ntBASIC12.47□□□□□ -0.41
CTSDP07339 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.47□□□□□ -0.41
CTSDP07339 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.47□□□□□ -0.41
CTSDP07339 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.47□□□□□ -0.41
CTSDP07339 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CTSDP07339 MIR3687-2-201ENST00000577708 61 ntBASIC12.47□□□□□ -0.41
CTSDP07339 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
CTSDP07339 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.47□□□□□ -0.41
CTSDP07339 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 MIR3687-1-201ENST00000614492 61 ntBASIC12.47□□□□□ -0.41
CTSDP07339 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CTSDP07339 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 CETN4P-206ENST00000642099 2168 ntBASIC12.47□□□□□ -0.41
CTSDP07339 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 DMBT1P1-203ENST00000636837 4628 ntBASIC12.47□□□□□ -0.41
CTSDP07339 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.47□□□□□ -0.41
CTSDP07339 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CTSDP07339 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CTSDP07339 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CTSDP07339 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CTSDP07339 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.46□□□□□ -0.41
CTSDP07339 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CTSDP07339 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.46□□□□□ -0.41
CTSDP07339 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CTSDP07339 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CTSDP07339 AC004945.1-201ENST00000416738 983 ntBASIC12.46□□□□□ -0.41
CTSDP07339 FAM58DP-201ENST00000428076 619 ntBASIC12.46□□□□□ -0.41
CTSDP07339 HLA-K-203ENST00000430151 1046 ntBASIC12.46□□□□□ -0.41
CTSDP07339 HTR5BP-201ENST00000430851 1154 ntBASIC12.46□□□□□ -0.41
CTSDP07339 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms