Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PDGFBP01127 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.79□□□□□ -0.04
PDGFBP01127 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.79□□□□□ -0.04
PDGFBP01127 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.79□□□□□ -0.04
PDGFBP01127 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.79□□□□□ -0.04
PDGFBP01127 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PDGFBP01127 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 OR51A9P-201ENST00000422578 911 ntBASIC14.78□□□□□ -0.04
PDGFBP01127 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.78□□□□□ -0.04
PDGFBP01127 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 RN7SL277P-201ENST00000481521 288 ntBASIC14.78□□□□□ -0.04
PDGFBP01127 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 GCOM2-201ENST00000509133 1104 ntBASIC14.78□□□□□ -0.04
PDGFBP01127 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.78□□□□□ -0.04
PDGFBP01127 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 PCDHB19P-201ENST00000570871 2371 ntBASIC14.78□□□□□ -0.04
PDGFBP01127 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.78□□□□□ -0.04
PDGFBP01127 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFBP01127 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.78□□□□□ -0.04
PDGFBP01127 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFBP01127 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
PDGFBP01127 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PDGFBP01127 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PDGFBP01127 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.77□□□□□ -0.04
PDGFBP01127 AC006372.4-201ENST00000624122 1543 ntBASIC14.77□□□□□ -0.04
PDGFBP01127 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFBP01127 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PDGFBP01127 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PDGFBP01127 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PDGFBP01127 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.77□□□□□ -0.04
PDGFBP01127 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFBP01127 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFBP01127 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFBP01127 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.77□□□□□ -0.04
PDGFBP01127 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFBP01127 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.77□□□□□ -0.04
PDGFBP01127 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PDGFBP01127 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFBP01127 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.77□□□□□ -0.04
PDGFBP01127 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFBP01127 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PDGFBP01127 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.77□□□□□ -0.05
PDGFBP01127 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.77□□□□□ -0.05
PDGFBP01127 AC092580.1-201ENST00000433998 658 ntBASIC14.77□□□□□ -0.05
PDGFBP01127 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.77□□□□□ -0.05
PDGFBP01127 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 GNG10P1-201ENST00000452289 199 ntBASIC14.77□□□□□ -0.05
PDGFBP01127 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.77□□□□□ -0.05
PDGFBP01127 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.77□□□□□ -0.05
PDGFBP01127 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms