Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 PFN1P12-201ENST00000455938 534 ntBASIC15.82■□□□□ 0.12
RTN3O95197 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.82■□□□□ 0.12
RTN3O95197 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.82■□□□□ 0.12
RTN3O95197 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.82■□□□□ 0.12
RTN3O95197 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.82■□□□□ 0.12
RTN3O95197 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.81■□□□□ 0.12
RTN3O95197 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 AC063926.3-201ENST00000624734 5658 ntBASIC15.81■□□□□ 0.12
RTN3O95197 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.81■□□□□ 0.12
RTN3O95197 FKBP4P6-201ENST00000457486 1332 ntBASIC15.81■□□□□ 0.12
RTN3O95197 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 FAM86HP-204ENST00000513466 959 ntBASIC15.81■□□□□ 0.12
RTN3O95197 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RTN3O95197 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RTN3O95197 AP006547.1-201ENST00000563435 692 ntBASIC15.81■□□□□ 0.12
RTN3O95197 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.81■□□□□ 0.12
RTN3O95197 MIR4741-201ENST00000579822 90 ntBASIC15.81■□□□□ 0.12
RTN3O95197 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTN3O95197 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
RTN3O95197 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTN3O95197 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RTN3O95197 PPT1-215ENST00000641471 2368 ntBASIC15.8■□□□□ 0.12
RTN3O95197 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTN3O95197 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.8■□□□□ 0.12
RTN3O95197 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.8■□□□□ 0.12
RTN3O95197 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.8■□□□□ 0.12
RTN3O95197 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RTN3O95197 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 AP000593.2-201ENST00000542775 1433 ntBASIC15.8■□□□□ 0.12
RTN3O95197 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.8■□□□□ 0.12
RTN3O95197 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.8■□□□□ 0.12
RTN3O95197 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTN3O95197 BTBD6P1-201ENST00000412176 1267 ntBASIC15.8■□□□□ 0.12
RTN3O95197 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.8■□□□□ 0.12
RTN3O95197 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.8■□□□□ 0.12
RTN3O95197 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTN3O95197 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.8■□□□□ 0.12
RTN3O95197 PPY2P-201ENST00000582808 702 ntBASIC15.8■□□□□ 0.12
RTN3O95197 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms