Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 Z97205.2-201ENST00000564697 1639 ntBASIC11.76□□□□□ -0.53
ZNF253O75346 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
ZNF253O75346 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.76□□□□□ -0.53
ZNF253O75346 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.76□□□□□ -0.53
ZNF253O75346 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.76□□□□□ -0.53
ZNF253O75346 RN7SL828P-201ENST00000607615 303 ntBASIC11.76□□□□□ -0.53
ZNF253O75346 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
ZNF253O75346 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.76□□□□□ -0.53
ZNF253O75346 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.76□□□□□ -0.53
ZNF253O75346 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ZNF253O75346 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.76□□□□□ -0.53
ZNF253O75346 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.75□□□□□ -0.53
ZNF253O75346 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
ZNF253O75346 KRT18P58-201ENST00000527480 1120 ntBASIC11.75□□□□□ -0.53
ZNF253O75346 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.75□□□□□ -0.53
ZNF253O75346 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.75□□□□□ -0.53
ZNF253O75346 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.75□□□□□ -0.53
ZNF253O75346 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms