Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.68□□□□□ -0.38
PDCD6O75340 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 TPRX2P-201ENST00000535362 881 ntBASIC12.68□□□□□ -0.38
PDCD6O75340 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.68□□□□□ -0.38
PDCD6O75340 DUX4L47-201ENST00000566374 394 ntBASIC12.68□□□□□ -0.38
PDCD6O75340 AC104794.3-201ENST00000566840 1248 ntBASIC12.68□□□□□ -0.38
PDCD6O75340 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.68□□□□□ -0.38
PDCD6O75340 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.68□□□□□ -0.38
PDCD6O75340 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDCD6O75340 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
PDCD6O75340 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.68□□□□□ -0.38
PDCD6O75340 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
PDCD6O75340 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 AL139094.1-201ENST00000405549 1188 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 MEP1AP4-201ENST00000423244 1087 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.67□□□□□ -0.38
PDCD6O75340 AC004890.2-204ENST00000481968 304 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 AC022616.1-201ENST00000518688 554 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.67□□□□□ -0.38
PDCD6O75340 DUX4L27-201ENST00000554796 1261 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.67□□□□□ -0.38
PDCD6O75340 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.67□□□□□ -0.38
PDCD6O75340 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.67□□□□□ -0.38
PDCD6O75340 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 AP001160.2-201ENST00000596071 487 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 AC007431.3-201ENST00000623221 587 ntBASIC12.67□□□□□ -0.38
PDCD6O75340 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.67□□□□□ -0.38
PDCD6O75340 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDCD6O75340 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDCD6O75340 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms