Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.03□□□□□ -0.16
CTNSO60931 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.03□□□□□ -0.16
CTNSO60931 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 AC004945.1-201ENST00000416738 983 ntBASIC14.03□□□□□ -0.16
CTNSO60931 AC099336.1-201ENST00000417053 1171 ntBASIC14.03□□□□□ -0.16
CTNSO60931 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.03□□□□□ -0.16
CTNSO60931 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.03□□□□□ -0.16
CTNSO60931 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 C2orf69P2-201ENST00000562032 1123 ntBASIC14.03□□□□□ -0.16
CTNSO60931 MIR4259-201ENST00000584466 101 ntBASIC14.03□□□□□ -0.16
CTNSO60931 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.03□□□□□ -0.16
CTNSO60931 AL359881.2-201ENST00000602973 570 ntBASIC14.03□□□□□ -0.16
CTNSO60931 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CTNSO60931 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CTNSO60931 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CTNSO60931 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CTNSO60931 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTNSO60931 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.02□□□□□ -0.16
CTNSO60931 CICP14-201ENST00000629111 2732 ntBASIC14.02□□□□□ -0.16
CTNSO60931 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.02□□□□□ -0.16
CTNSO60931 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.02□□□□□ -0.16
CTNSO60931 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CTNSO60931 AC020910.5-201ENST00000623668 1865 ntBASIC14.02□□□□□ -0.16
CTNSO60931 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.02□□□□□ -0.16
CTNSO60931 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTNSO60931 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 RN7SKP175-201ENST00000408472 289 ntBASIC14.02□□□□□ -0.17
CTNSO60931 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.02□□□□□ -0.17
CTNSO60931 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.02□□□□□ -0.17
CTNSO60931 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 AP003171.2-201ENST00000528208 925 ntBASIC14.02□□□□□ -0.17
CTNSO60931 AC131206.1-201ENST00000538078 1211 ntBASIC14.02□□□□□ -0.17
CTNSO60931 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.02□□□□□ -0.17
CTNSO60931 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.02□□□□□ -0.17
CTNSO60931 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.02□□□□□ -0.17
CTNSO60931 ZACNP1-201ENST00000612259 710 ntBASIC14.02□□□□□ -0.17
CTNSO60931 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.02□□□□□ -0.17
CTNSO60931 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTNSO60931 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CTNSO60931 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.01□□□□□ -0.17
CTNSO60931 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.01□□□□□ -0.17
CTNSO60931 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CTNSO60931 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTNSO60931 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.01□□□□□ -0.17
CTNSO60931 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.01□□□□□ -0.17
CTNSO60931 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTNSO60931 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.01□□□□□ -0.17
CTNSO60931 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms