Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
OPHN1O60890 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.72■□□□□ 0.11
OPHN1O60890 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.72■□□□□ 0.11
OPHN1O60890 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.72■□□□□ 0.11
OPHN1O60890 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.72■□□□□ 0.11
OPHN1O60890 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.72■□□□□ 0.11
OPHN1O60890 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
OPHN1O60890 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.72■□□□□ 0.11
OPHN1O60890 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 AC007292.2-201ENST00000593524 1812 ntBASIC15.72■□□□□ 0.11
OPHN1O60890 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.72■□□□□ 0.11
OPHN1O60890 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.72■□□□□ 0.11
OPHN1O60890 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
OPHN1O60890 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.72■□□□□ 0.11
OPHN1O60890 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
OPHN1O60890 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.71■□□□□ 0.11
OPHN1O60890 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
OPHN1O60890 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.71■□□□□ 0.11
OPHN1O60890 AC099336.1-201ENST00000417053 1171 ntBASIC15.71■□□□□ 0.11
OPHN1O60890 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.71■□□□□ 0.11
OPHN1O60890 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.71■□□□□ 0.11
OPHN1O60890 ACTG1P3-201ENST00000431775 1114 ntBASIC15.71■□□□□ 0.11
OPHN1O60890 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.71■□□□□ 0.11
OPHN1O60890 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.71■□□□□ 0.11
OPHN1O60890 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.71■□□□□ 0.11
OPHN1O60890 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.71■□□□□ 0.11
OPHN1O60890 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.71■□□□□ 0.11
OPHN1O60890 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 SAMD11P1-201ENST00000571429 661 ntBASIC15.71■□□□□ 0.11
OPHN1O60890 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.71■□□□□ 0.11
OPHN1O60890 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.71■□□□□ 0.11
OPHN1O60890 AC244093.1-201ENST00000610837 814 ntBASIC15.71■□□□□ 0.11
OPHN1O60890 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 RPSAP52-203ENST00000622976 1023 ntBASIC15.71■□□□□ 0.11
OPHN1O60890 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
OPHN1O60890 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.71■□□□□ 0.11
OPHN1O60890 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
OPHN1O60890 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
OPHN1O60890 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.71■□□□□ 0.1
OPHN1O60890 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms