Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CTNND1O60716 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.37■□□□□ 0.37
CTNND1O60716 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.37■□□□□ 0.37
CTNND1O60716 AC126365.1-201ENST00000578585 1514 ntBASIC17.37■□□□□ 0.37
CTNND1O60716 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNND1O60716 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 REXO1L2P-201ENST00000425429 2069 ntBASIC17.37■□□□□ 0.37
CTNND1O60716 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTNND1O60716 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 AL645933.1-201ENST00000440087 609 ntBASIC17.37■□□□□ 0.37
CTNND1O60716 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.37■□□□□ 0.37
CTNND1O60716 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.37■□□□□ 0.37
CTNND1O60716 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
CTNND1O60716 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNND1O60716 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CTNND1O60716 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.37■□□□□ 0.37
CTNND1O60716 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 PKD1P5-201ENST00000532415 10291 ntBASIC17.37■□□□□ 0.37
CTNND1O60716 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTNND1O60716 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNND1O60716 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNND1O60716 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNND1O60716 C18orf15-201ENST00000623680 2534 ntBASIC17.37■□□□□ 0.37
CTNND1O60716 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNND1O60716 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTNND1O60716 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.36■□□□□ 0.37
CTNND1O60716 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNND1O60716 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.36■□□□□ 0.37
CTNND1O60716 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNND1O60716 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTNND1O60716 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNND1O60716 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.36■□□□□ 0.37
CTNND1O60716 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.36■□□□□ 0.37
CTNND1O60716 RPL17P11-201ENST00000417593 544 ntBASIC17.36■□□□□ 0.37
CTNND1O60716 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.36■□□□□ 0.37
CTNND1O60716 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.36■□□□□ 0.37
CTNND1O60716 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.36■□□□□ 0.37
CTNND1O60716 AC006122.1-201ENST00000493323 440 ntBASIC17.36■□□□□ 0.37
CTNND1O60716 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.36■□□□□ 0.37
CTNND1O60716 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNND1O60716 AL157813.1-201ENST00000612996 587 ntBASIC17.36■□□□□ 0.37
CTNND1O60716 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNND1O60716 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.36■□□□□ 0.37
CTNND1O60716 AC023024.2-201ENST00000623561 1993 ntBASIC17.36■□□□□ 0.37
CTNND1O60716 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CTNND1O60716 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 WASH3P-207ENST00000560956 1394 ntBASIC17.36■□□□□ 0.37
CTNND1O60716 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNND1O60716 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CTNND1O60716 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms