Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 AC027612.1-201ENST00000445234 2395 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 AGGF1P1-201ENST00000509500 2073 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
SSSCA1O60232 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.27□□□□□ -0.44
SSSCA1O60232 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.27□□□□□ -0.44
SSSCA1O60232 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.27□□□□□ -0.44
SSSCA1O60232 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SSSCA1O60232 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SSSCA1O60232 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SSSCA1O60232 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSSCA1O60232 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 STRCP1-201ENST00000509801 5328 ntBASIC12.27□□□□□ -0.45
SSSCA1O60232 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 AC074338.1-201ENST00000416825 156 ntBASIC12.27□□□□□ -0.45
SSSCA1O60232 ADH5P3-201ENST00000433842 1137 ntBASIC12.27□□□□□ -0.45
SSSCA1O60232 KRT18P64-201ENST00000434946 1219 ntBASIC12.27□□□□□ -0.45
SSSCA1O60232 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 TIMM8BP1-201ENST00000452384 211 ntBASIC12.27□□□□□ -0.45
SSSCA1O60232 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.27□□□□□ -0.45
SSSCA1O60232 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.27□□□□□ -0.45
SSSCA1O60232 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SSSCA1O60232 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.27□□□□□ -0.45
SSSCA1O60232 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 AC012617.1-204ENST00000586340 2305 ntBASIC12.27□□□□□ -0.45
SSSCA1O60232 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 INE2-201ENST00000630399 1874 ntBASIC12.27□□□□□ -0.45
SSSCA1O60232 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SSSCA1O60232 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SSSCA1O60232 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.27□□□□□ -0.45
SSSCA1O60232 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSSCA1O60232 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.26□□□□□ -0.45
SSSCA1O60232 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms