Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.11■□□□□ 0.01
KDELR3O43731 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KDELR3O43731 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
KDELR3O43731 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 MIR326-201ENST00000362220 95 ntBASIC15.11■□□□□ 0.01
KDELR3O43731 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.11■□□□□ 0.01
KDELR3O43731 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 MIR1908-201ENST00000410394 80 ntBASIC15.11■□□□□ 0.01
KDELR3O43731 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
KDELR3O43731 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.11■□□□□ 0.01
KDELR3O43731 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.11■□□□□ 0.01
KDELR3O43731 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.11■□□□□ 0.01
KDELR3O43731 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.11■□□□□ 0.01
KDELR3O43731 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
KDELR3O43731 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.11■□□□□ 0.01
KDELR3O43731 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
KDELR3O43731 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.11■□□□□ 0.01
KDELR3O43731 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.11■□□□□ 0.01
KDELR3O43731 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.11■□□□□ 0.01
KDELR3O43731 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.11■□□□□ 0.01
KDELR3O43731 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KDELR3O43731 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDELR3O43731 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
KDELR3O43731 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.1■□□□□ 0.01
KDELR3O43731 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 AC007274.1-201ENST00000439805 662 ntBASIC15.1■□□□□ 0.01
KDELR3O43731 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 DUX4L46-201ENST00000566845 751 ntBASIC15.1■□□□□ 0.01
KDELR3O43731 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.1■□□□□ 0.01
KDELR3O43731 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 AC027601.3-201ENST00000622907 509 ntBASIC15.1■□□□□ 0.01
KDELR3O43731 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 AL354702.1-201ENST00000442006 1960 ntBASIC15.1■□□□□ 0.01
KDELR3O43731 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
KDELR3O43731 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
KDELR3O43731 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 PCDHA3-202ENST00000532566 4594 ntBASIC15.1■□□□□ 0.01
KDELR3O43731 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.1■□□□□ 0.01
KDELR3O43731 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KDELR3O43731 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KDELR3O43731 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.09■□□□□ 0.01
KDELR3O43731 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KDELR3O43731 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
KDELR3O43731 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
KDELR3O43731 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KDELR3O43731 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KDELR3O43731 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KDELR3O43731 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KDELR3O43731 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.09■□□□□ 0.01
KDELR3O43731 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
KDELR3O43731 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
KDELR3O43731 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KDELR3O43731 BRWD1P1-201ENST00000401091 371 ntBASIC15.09■□□□□ 0.01
KDELR3O43731 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.09■□□□□ 0.01
KDELR3O43731 HSPB1P2-201ENST00000448722 546 ntBASIC15.09■□□□□ 0.01
KDELR3O43731 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms