Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MSI1O43347 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.52■□□□□ 0.08
MSI1O43347 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.52■□□□□ 0.08
MSI1O43347 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
MSI1O43347 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
MSI1O43347 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.52■□□□□ 0.08
MSI1O43347 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 MTX1P1-201ENST00000440904 838 ntBASIC15.52■□□□□ 0.08
MSI1O43347 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.52■□□□□ 0.08
MSI1O43347 RPSAP36-202ENST00000494591 1261 ntBASIC15.52■□□□□ 0.08
MSI1O43347 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.52■□□□□ 0.08
MSI1O43347 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.52■□□□□ 0.08
MSI1O43347 MIR4538-201ENST00000581377 78 ntBASIC15.52■□□□□ 0.08
MSI1O43347 RN7SL219P-201ENST00000582872 296 ntBASIC15.52■□□□□ 0.08
MSI1O43347 AL358472.3-201ENST00000608147 415 ntBASIC15.52■□□□□ 0.08
MSI1O43347 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.52■□□□□ 0.08
MSI1O43347 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MSI1O43347 AC002472.3-201ENST00000640124 621 ntBASIC15.52■□□□□ 0.08
MSI1O43347 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MSI1O43347 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.52■□□□□ 0.07
MSI1O43347 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.52■□□□□ 0.07
MSI1O43347 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.52■□□□□ 0.07
MSI1O43347 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
MSI1O43347 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
MSI1O43347 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MSI1O43347 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
MSI1O43347 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
MSI1O43347 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
MSI1O43347 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 FGD5P1-202ENST00000614866 2498 ntBASIC15.51■□□□□ 0.07
MSI1O43347 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
MSI1O43347 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.51■□□□□ 0.07
MSI1O43347 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.51■□□□□ 0.07
MSI1O43347 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 TLE1P1-201ENST00000422965 589 ntBASIC15.51■□□□□ 0.07
MSI1O43347 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 ACTBP11-201ENST00000436287 1126 ntBASIC15.51■□□□□ 0.07
MSI1O43347 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.51■□□□□ 0.07
MSI1O43347 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.51■□□□□ 0.07
MSI1O43347 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.51■□□□□ 0.07
MSI1O43347 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.51■□□□□ 0.07
MSI1O43347 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.51■□□□□ 0.07
MSI1O43347 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.51■□□□□ 0.07
MSI1O43347 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.51■□□□□ 0.07
MSI1O43347 AP001002.3-201ENST00000623482 206 ntBASIC15.51■□□□□ 0.07
MSI1O43347 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 AC018442.1-201ENST00000421439 2061 ntBASIC15.51■□□□□ 0.07
MSI1O43347 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.51■□□□□ 0.07
MSI1O43347 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MSI1O43347 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 AC006058.4-201ENST00000624016 1670 ntBASIC15.51■□□□□ 0.07
MSI1O43347 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSI1O43347 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms