Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
TSPAN4O14817 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TSPAN4O14817 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.71□□□□□ -0.37
TSPAN4O14817 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.71□□□□□ -0.37
TSPAN4O14817 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TSPAN4O14817 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.71□□□□□ -0.37
TSPAN4O14817 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.71□□□□□ -0.37
TSPAN4O14817 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.71□□□□□ -0.37
TSPAN4O14817 IGLL3P-201ENST00000412472 434 ntBASIC12.71□□□□□ -0.37
TSPAN4O14817 HCG4-201ENST00000418983 998 ntBASIC12.71□□□□□ -0.37
TSPAN4O14817 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.71□□□□□ -0.37
TSPAN4O14817 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.71□□□□□ -0.37
TSPAN4O14817 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TSPAN4O14817 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.71□□□□□ -0.37
TSPAN4O14817 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.71□□□□□ -0.37
TSPAN4O14817 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.71□□□□□ -0.37
TSPAN4O14817 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.71□□□□□ -0.37
TSPAN4O14817 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.71□□□□□ -0.37
TSPAN4O14817 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.71□□□□□ -0.37
TSPAN4O14817 AC140113.2-201ENST00000604370 208 ntBASIC12.71□□□□□ -0.37
TSPAN4O14817 AP001350.2-201ENST00000625104 1094 ntBASIC12.71□□□□□ -0.37
TSPAN4O14817 AC007064.4-201ENST00000637740 555 ntBASIC12.71□□□□□ -0.37
TSPAN4O14817 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.71□□□□□ -0.37
TSPAN4O14817 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TSPAN4O14817 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.71□□□□□ -0.37
TSPAN4O14817 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.71□□□□□ -0.38
TSPAN4O14817 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.71□□□□□ -0.38
TSPAN4O14817 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.38
TSPAN4O14817 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TSPAN4O14817 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 AC006277.1-201ENST00000624348 1610 ntBASIC12.7□□□□□ -0.38
TSPAN4O14817 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TSPAN4O14817 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.7□□□□□ -0.38
TSPAN4O14817 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.7□□□□□ -0.38
TSPAN4O14817 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.7□□□□□ -0.38
TSPAN4O14817 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 MIR574-201ENST00000385209 96 ntBASIC12.7□□□□□ -0.38
TSPAN4O14817 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.7□□□□□ -0.38
TSPAN4O14817 AC007967.2-201ENST00000432613 625 ntBASIC12.7□□□□□ -0.38
TSPAN4O14817 RHOQP3-201ENST00000437982 621 ntBASIC12.7□□□□□ -0.38
TSPAN4O14817 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
TSPAN4O14817 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.7□□□□□ -0.38
TSPAN4O14817 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 MPDU1-223ENST00000582151 728 ntBASIC12.7□□□□□ -0.38
TSPAN4O14817 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 ACTL9-202ENST00000612068 1252 ntBASIC12.7□□□□□ -0.38
TSPAN4O14817 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.7□□□□□ -0.38
TSPAN4O14817 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.7□□□□□ -0.38
TSPAN4O14817 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.7□□□□□ -0.38
TSPAN4O14817 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TSPAN4O14817 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms