Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.08□□□□□ -0.64
NACAE9PAV3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 AC099063.4-201ENST00000641099 1602 ntBASIC11.08□□□□□ -0.64
NACAE9PAV3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
NACAE9PAV3 GHSR-202ENST00000427970 912 ntBASIC11.08□□□□□ -0.64
NACAE9PAV3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.08□□□□□ -0.64
NACAE9PAV3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.08□□□□□ -0.64
NACAE9PAV3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.08□□□□□ -0.64
NACAE9PAV3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.08□□□□□ -0.64
NACAE9PAV3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.08□□□□□ -0.64
NACAE9PAV3 TPRX2P-201ENST00000535362 881 ntBASIC11.08□□□□□ -0.64
NACAE9PAV3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.08□□□□□ -0.64
NACAE9PAV3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.08□□□□□ -0.64
NACAE9PAV3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.08□□□□□ -0.64
NACAE9PAV3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.08□□□□□ -0.64
NACAE9PAV3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
NACAE9PAV3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
NACAE9PAV3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
NACAE9PAV3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.08□□□□□ -0.64
NACAE9PAV3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.08□□□□□ -0.64
NACAE9PAV3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.08□□□□□ -0.64
NACAE9PAV3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NACAE9PAV3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NACAE9PAV3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 ACA64.2-201ENST00000459014 129 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 AC092337.1-201ENST00000568699 1129 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 AL031595.1-201ENST00000623969 4709 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 SPDYE19P-201ENST00000338590 713 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 AC135586.1-201ENST00000539323 574 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms