Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 DUX4L47-201ENST00000566374 394 ntBASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AC241585.1-201ENST00000433527 519 ntBASIC14.18□□□□□ -0.14
VAPAQ9P0L0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 VDAC1P7-201ENST00000462417 847 ntBASIC14.18□□□□□ -0.14
VAPAQ9P0L0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AC036164.1-201ENST00000570544 333 ntBASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AC004840.1-201ENST00000636359 365 ntBASIC14.18□□□□□ -0.14
VAPAQ9P0L0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 PRSS30P-206ENST00000641773 873 ntBASIC14.18□□□□□ -0.14
VAPAQ9P0L0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.18□□□□□ -0.14
VAPAQ9P0L0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms