Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AL138799.1-201ENST00000448213 1675 ntBASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 DRD5P1-201ENST00000456605 1438 ntBASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AL139400.1-201ENST00000366220 510 ntBASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 NUS1P3-201ENST00000423502 862 ntBASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AC114501.2-201ENST00000439631 535 ntBASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AC125807.1-201ENST00000483097 614 ntBASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SNHG9-202ENST00000564014 471 ntBASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE2Q9NRR3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms