Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 AL356737.1-201ENST00000634391 234 ntBASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 AC002472.3-201ENST00000640124 621 ntBASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 INTS4P1-203ENST00000641008 3683 ntBASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 AC097359.2-201ENST00000604992 2389 ntBASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 MTHFR-210ENST00000641407 2387 ntBASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
KRTAP4-3Q9BYR4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC012508.2-201ENST00000567613 1472 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC003102.2-201ENST00000589195 1469 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC006504.5-208ENST00000588784 2401 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 MBLAC2-202ENST00000514906 1936 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CICP24-201ENST00000605464 2705 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AL596257.1-201ENST00000641463 2694 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC126177.1-201ENST00000547829 2218 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms