Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AC105206.1-202ENST00000314927 2368 ntBASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 AC015688.4-201ENST00000580780 1647 ntBASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 AC087499.6-201ENST00000411576 835 ntBASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 AC004233.3-201ENST00000607794 1269 ntBASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO3Q9BXY4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 KHSRPP1-201ENST00000427983 1768 ntBASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 TP53TG3HP-202ENST00000569755 579 ntBASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 GNRHR2-203ENST00000581100 1187 ntBASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 AC138466.3-201ENST00000619983 221 ntBASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms