Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 MIR4741-201ENST00000579822 90 ntBASIC20.73■□□□□ 0.91
CCDC7Q96M83 RN7SL190P-201ENST00000582519 257 ntBASIC20.73■□□□□ 0.91
CCDC7Q96M83 EEF1DP1-201ENST00000585891 896 ntBASIC20.73■□□□□ 0.91
CCDC7Q96M83 AC244452.3-201ENST00000636814 210 ntBASIC20.73■□□□□ 0.91
CCDC7Q96M83 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC7Q96M83 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC7Q96M83 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC7Q96M83 AL009178.2-201ENST00000597278 2719 ntBASIC20.73■□□□□ 0.91
CCDC7Q96M83 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC7Q96M83 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 AC138028.6-201ENST00000616106 1482 ntBASIC20.73■□□□□ 0.91
CCDC7Q96M83 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC7Q96M83 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC7Q96M83 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AC073413.1-201ENST00000603927 732 ntBASIC20.72■□□□□ 0.91
CCDC7Q96M83 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 USP28-214ENST00000545540 3431 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AL590440.2-201ENST00000641973 1595 ntBASIC20.72■□□□□ 0.91
CCDC7Q96M83 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AKR7A2P1-201ENST00000460134 915 ntBASIC20.72■□□□□ 0.91
CCDC7Q96M83 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 AC006453.4-201ENST00000636949 1252 ntBASIC20.72■□□□□ 0.91
CCDC7Q96M83 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC7Q96M83 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC7Q96M83 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 AL136172.1-201ENST00000598590 1394 ntBASIC20.71■□□□□ 0.91
CCDC7Q96M83 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.71■□□□□ 0.91
CCDC7Q96M83 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 TPM3P8-201ENST00000330554 643 ntBASIC20.71■□□□□ 0.91
CCDC7Q96M83 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 RPSAP36-202ENST00000494591 1261 ntBASIC20.71■□□□□ 0.91
CCDC7Q96M83 ALG3P1-201ENST00000508806 1114 ntBASIC20.71■□□□□ 0.91
CCDC7Q96M83 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 ACTG1P17-201ENST00000558391 1119 ntBASIC20.71■□□□□ 0.91
CCDC7Q96M83 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 OR10B1P-201ENST00000601666 907 ntBASIC20.71■□□□□ 0.91
CCDC7Q96M83 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC7Q96M83 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC7Q96M83 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 MRPL37P1-201ENST00000592451 1337 ntBASIC20.7■□□□□ 0.9
CCDC7Q96M83 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms