Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 AC245100.3-201ENST00000441281 285 ntBASIC15.23■□□□□ 0.03
RTP4Q96DX8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 ACA64.2-201ENST00000459014 129 ntBASIC15.23■□□□□ 0.03
RTP4Q96DX8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 RN7SL832P-201ENST00000607781 1756 ntBASIC15.23■□□□□ 0.03
RTP4Q96DX8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 INE2-201ENST00000630399 1874 ntBASIC15.23■□□□□ 0.03
RTP4Q96DX8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 AC020910.6-201ENST00000623084 1459 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 AC112492.5-201ENST00000421897 457 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 TTTY23B-201ENST00000442790 549 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 AC012441.1-201ENST00000446669 685 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 ALG3P1-201ENST00000508806 1114 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 KRT17P8-201ENST00000540749 863 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 AC103988.2-201ENST00000561804 725 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 BX088702.1-201ENST00000610784 235 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 AC015656.1-201ENST00000624209 3578 ntBASIC15.22■□□□□ 0.03
RTP4Q96DX8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.22■□□□□ 0.03
RTP4Q96DX8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTP4Q96DX8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 AC068587.6-202ENST00000641839 5619 ntBASIC15.21■□□□□ 0.03
RTP4Q96DX8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 MSTO2P-201ENST00000314835 1709 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms