Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
HPS1Q92902 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HPS1Q92902 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
HPS1Q92902 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.89□□□□□ -0.19
HPS1Q92902 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 AP000568.1-201ENST00000282964 442 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HPS1Q92902 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HPS1Q92902 MIR346-201ENST00000362234 95 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.89□□□□□ -0.19
HPS1Q92902 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.89□□□□□ -0.19
HPS1Q92902 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.89□□□□□ -0.19
HPS1Q92902 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 AC190387.1-201ENST00000551683 408 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 AC027307.2-201ENST00000591252 911 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.89□□□□□ -0.19
HPS1Q92902 AL390955.2-201ENST00000603032 514 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 AL158211.3-201ENST00000607385 239 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 AC048344.4-201ENST00000619744 527 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 AC027348.2-201ENST00000624375 642 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HPS1Q92902 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.89□□□□□ -0.19
HPS1Q92902 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HPS1Q92902 AC126365.1-201ENST00000578585 1514 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 AL591122.2-201ENST00000624125 1853 ntBASIC13.89□□□□□ -0.19
HPS1Q92902 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.88□□□□□ -0.19
HPS1Q92902 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HPS1Q92902 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.88□□□□□ -0.19
HPS1Q92902 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 CES1P1-201ENST00000421606 1704 ntBASIC13.88□□□□□ -0.19
HPS1Q92902 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.88□□□□□ -0.19
HPS1Q92902 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HPS1Q92902 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
HPS1Q92902 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.88□□□□□ -0.19
HPS1Q92902 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.88□□□□□ -0.19
HPS1Q92902 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.88□□□□□ -0.19
HPS1Q92902 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.88□□□□□ -0.19
HPS1Q92902 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.88□□□□□ -0.19
HPS1Q92902 SPDYE14P-201ENST00000442619 822 ntBASIC13.88□□□□□ -0.19
HPS1Q92902 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HPS1Q92902 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC13.88□□□□□ -0.19
HPS1Q92902 ALG1L8P-201ENST00000533887 760 ntBASIC13.88□□□□□ -0.19
HPS1Q92902 AP000842.3-202ENST00000569238 1080 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms