Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC091304.3-201ENST00000566500 716 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AC104961.1-201ENST00000427605 771 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 EEF1DP5-201ENST00000431410 772 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 ST13P19-201ENST00000442505 1124 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 BCRP4-201ENST00000506079 804 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 INO80E-209ENST00000567254 625 ntTSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AL591424.3-201ENST00000614278 872 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AC139712.1-201ENST00000378256 1875 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 KRT8P43-201ENST00000406052 1458 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AC008894.3-201ENST00000624324 3103 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 RN7SL173P-201ENST00000461853 292 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PRSS3P1-201ENST00000503996 742 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 EEF1GP8-201ENST00000506566 1154 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AC004923.3-201ENST00000527532 355 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AL132994.1-201ENST00000554098 400 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 AL136982.5-201ENST00000605222 294 ntBASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
ALMS1Q8TCU4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 AC068831.5-201ENST00000557387 328 ntBASIC9.71□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms