Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 ENPP7P14-201ENST00000621765 1040 ntBASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 FAM21FP-201ENST00000426241 1131 ntBASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AC245100.3-201ENST00000441281 285 ntBASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 YBX1P6-201ENST00000442962 1002 ntBASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AC008687.7-202ENST00000637404 953 ntBASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AL033527.4-201ENST00000641026 673 ntBASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FNDC9Q8TBE3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms