Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 MIR1247-201ENST00000408206 136 ntBASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 AC244093.1-201ENST00000610837 814 ntBASIC16.07■□□□□ 0.16
BEST2Q8NFU1 AL096828.3-201ENST00000615354 462 ntBASIC16.07■□□□□ 0.16
BEST2Q8NFU1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 LINC01101-201ENST00000622953 1884 ntBASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.07■□□□□ 0.16
BEST2Q8NFU1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AL133338.1-201ENST00000565695 1517 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 MIR663B-201ENST00000408361 115 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 GPAA1P2-201ENST00000417923 928 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 ALG3P1-201ENST00000508806 1114 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 GCOM2-201ENST00000509133 1104 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AC131206.1-201ENST00000538078 1211 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AC104982.3-201ENST00000581995 514 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms