Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 BEND3P1-201ENST00000421591 1944 ntBASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 ACKR1-201ENST00000368121 1240 ntBASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 AC133539.2-201ENST00000604757 467 ntBASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 AP005019.2-201ENST00000615104 511 ntBASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 AC008761.3-201ENST00000624803 892 ntBASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 AC007541.1-201ENST00000570282 1469 ntBASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LSMEM1Q8N8F7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AC098850.1-201ENST00000419919 790 ntBASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 TSPY16P-201ENST00000449843 468 ntBASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 GIMAP3P-201ENST00000495150 836 ntBASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AP001582.1-201ENST00000525856 295 ntBASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AC027796.2-201ENST00000575326 344 ntBASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AL132655.2-201ENST00000596276 594 ntBASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AC007326.2-201ENST00000624224 7579 ntBASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 754.1 ms