Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 HSPB1P2-201ENST00000448722 546 ntBASIC16.31■□□□□ 0.2
VPS52Q8N1B4 AC005077.2-201ENST00000449786 690 ntBASIC16.31■□□□□ 0.2
VPS52Q8N1B4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 AC090616.6-203ENST00000579186 1945 ntBASIC16.31■□□□□ 0.2
VPS52Q8N1B4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
VPS52Q8N1B4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AC084364.1-201ENST00000551967 1556 ntBASIC16.3■□□□□ 0.2
VPS52Q8N1B4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AC079178.1-201ENST00000420915 656 ntBASIC16.3■□□□□ 0.2
VPS52Q8N1B4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 COX5BP1-201ENST00000507622 393 ntBASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.3■□□□□ 0.2
VPS52Q8N1B4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 AC023157.3-201ENST00000619086 2088 ntBASIC16.3■□□□□ 0.2
VPS52Q8N1B4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS52Q8N1B4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 RNA5SP423-201ENST00000517127 109 ntBASIC16.29■□□□□ 0.2
VPS52Q8N1B4 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms