Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 AC010336.2-201ENST00000564226 506 ntBASIC13.42□□□□□ -0.26
LRRC28Q86X40 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 LINC02560-201ENST00000596379 459 ntBASIC13.42□□□□□ -0.26
LRRC28Q86X40 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 AC009118.2-201ENST00000613275 655 ntBASIC13.42□□□□□ -0.26
LRRC28Q86X40 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 DGCR9-201ENST00000609630 2415 ntBASIC13.42□□□□□ -0.26
LRRC28Q86X40 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
LRRC28Q86X40 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 AC023090.2-201ENST00000625182 2110 ntBASIC13.42□□□□□ -0.26
LRRC28Q86X40 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC28Q86X40 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 AC236430.1-201ENST00000402231 743 ntBASIC13.41□□□□□ -0.26
LRRC28Q86X40 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 SDHAP3-202ENST00000515467 728 ntBASIC13.41□□□□□ -0.26
LRRC28Q86X40 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 AL512361.1-201ENST00000554200 418 ntBASIC13.41□□□□□ -0.26
LRRC28Q86X40 AC138761.1-201ENST00000584393 385 ntBASIC13.41□□□□□ -0.26
LRRC28Q86X40 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 AC008761.3-201ENST00000624803 892 ntBASIC13.41□□□□□ -0.26
LRRC28Q86X40 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC28Q86X40 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRC28Q86X40 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LRRC28Q86X40 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC28Q86X40 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms