Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 CSNK1G2P1-201ENST00000442675 955 ntBASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 ST5-261ENST00000626808 1071 ntTSL 5 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 CCT8L1P-201ENST00000465400 1674 ntBASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPAQ5VT25 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 COX20P1-201ENST00000366529 357 ntBASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AC093826.1-201ENST00000508655 993 ntBASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 NT5C-204ENST00000578337 582 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AL354702.1-201ENST00000442006 1960 ntBASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AC018638.5-201ENST00000450885 754 ntBASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AP003398.1-201ENST00000531124 318 ntBASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 MAX-218ENST00000557746 571 ntTSL 4 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
CDC42BPAQ5VT25 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 AC008894.3-201ENST00000624324 3103 ntBASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 GCSHP3-201ENST00000431120 391 ntBASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPAQ5VT25 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 LINC00265-2P-201ENST00000413372 782 ntBASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 FTX-216ENST00000638985 1367 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPAQ5VT25 BAK1P1-201ENST00000317045 636 ntBASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 HKR1-225ENST00000592168 566 ntTSL 4 BASIC21.89■■□□□ 1.1
CDC42BPAQ5VT25 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms