Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 NME4-212ENST00000621774 904 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AC012617.1-204ENST00000586340 2305 ntBASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AC105206.1-202ENST00000314927 2368 ntBASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 MIR940-201ENST00000401276 94 ntBASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TMEM198B-204ENST00000484016 896 ntBASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms