Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 CICP8-201ENST00000455800 2813 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.36□□□□□ -0.27
EFNB1P98172 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
EFNB1P98172 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.36□□□□□ -0.27
EFNB1P98172 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 EIF3FP3-201ENST00000434851 1086 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 AC114812.1-204ENST00000449669 728 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.36□□□□□ -0.27
EFNB1P98172 VDAC1P7-201ENST00000462417 847 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 AC125807.1-201ENST00000483097 614 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.36□□□□□ -0.27
EFNB1P98172 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.36□□□□□ -0.27
EFNB1P98172 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
EFNB1P98172 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.36□□□□□ -0.27
EFNB1P98172 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 BRI3BPP1-201ENST00000594224 787 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNB1P98172 AL138725.1-201ENST00000407347 1314 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNB1P98172 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNB1P98172 AL591122.2-201ENST00000624125 1853 ntBASIC13.36□□□□□ -0.27
EFNB1P98172 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 AGAP10P-201ENST00000454844 2418 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 AC020658.7-201ENST00000624274 2442 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNB1P98172 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNB1P98172 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 AL136172.1-201ENST00000598590 1394 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
EFNB1P98172 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNB1P98172 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.35□□□□□ -0.27
EFNB1P98172 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 GIMAP3P-201ENST00000495150 836 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.35□□□□□ -0.27
EFNB1P98172 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
EFNB1P98172 AP001002.3-201ENST00000623482 206 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 AC004840.1-201ENST00000636359 365 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms