Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCR4P61073 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCR4P61073 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCR4P61073 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCR4P61073 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.69□□□□□ -0.22
CXCR4P61073 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CXCR4P61073 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCR4P61073 AC005829.1-201ENST00000570002 483 ntBASIC13.69□□□□□ -0.22
CXCR4P61073 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCR4P61073 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
CXCR4P61073 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.69□□□□□ -0.22
CXCR4P61073 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCR4P61073 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCR4P61073 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCR4P61073 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CXCR4P61073 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CXCR4P61073 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 RN7SL832P-201ENST00000607781 1756 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CXCR4P61073 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CXCR4P61073 AC004241.5-201ENST00000623870 2448 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 MIR574-201ENST00000385209 96 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 AC004461.1-201ENST00000412461 403 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 SPDYE14P-201ENST00000442619 822 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.68□□□□□ -0.22
CXCR4P61073 AC093520.2-201ENST00000561830 333 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.68□□□□□ -0.22
CXCR4P61073 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
CXCR4P61073 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 AL513210.1-201ENST00000629608 234 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 CICP16-201ENST00000502609 2813 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 AL122018.1-201ENST00000446607 2310 ntBASIC13.68□□□□□ -0.22
CXCR4P61073 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CXCR4P61073 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCR4P61073 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CXCR4P61073 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 650.3 ms