Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.87□□□□□ -0.19
SMIM11AP58511 AL353779.1-201ENST00000434793 351 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM11AP58511 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.87□□□□□ -0.19
SMIM11AP58511 HLA-J-203ENST00000494367 1087 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.87□□□□□ -0.19
SMIM11AP58511 AC069120.2-201ENST00000524091 540 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.87□□□□□ -0.19
SMIM11AP58511 AC044860.1-202ENST00000559481 777 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SMIM11AP58511 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.87□□□□□ -0.19
SMIM11AP58511 AC010327.4-202ENST00000591484 748 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM11AP58511 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM11AP58511 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 AL158070.2-201ENST00000623713 1621 ntBASIC13.86□□□□□ -0.19
SMIM11AP58511 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM11AP58511 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM11AP58511 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM11AP58511 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM11AP58511 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.86□□□□□ -0.19
SMIM11AP58511 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM11AP58511 AC027369.6-201ENST00000525520 931 ntBASIC13.86□□□□□ -0.19
SMIM11AP58511 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.86□□□□□ -0.19
SMIM11AP58511 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.86□□□□□ -0.19
SMIM11AP58511 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
SMIM11AP58511 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM11AP58511 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMIM11AP58511 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMIM11AP58511 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM11AP58511 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM11AP58511 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM11AP58511 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 MST1P2-201ENST00000457982 2291 ntBASIC13.85□□□□□ -0.19
SMIM11AP58511 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM11AP58511 AL138799.1-201ENST00000448213 1675 ntBASIC13.85□□□□□ -0.19
SMIM11AP58511 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM11AP58511 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM11AP58511 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SMIM11AP58511 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM11AP58511 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM11AP58511 BX842568.4-201ENST00000421222 227 ntBASIC13.85□□□□□ -0.19
SMIM11AP58511 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM11AP58511 AC114501.2-201ENST00000439631 535 ntBASIC13.85□□□□□ -0.19
SMIM11AP58511 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM11AP58511 AC125807.1-201ENST00000483097 614 ntBASIC13.85□□□□□ -0.19
SMIM11AP58511 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.85□□□□□ -0.19
SMIM11AP58511 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.85□□□□□ -0.19
SMIM11AP58511 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM11AP58511 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM11AP58511 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.85□□□□□ -0.19
SMIM11AP58511 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM11AP58511 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM11AP58511 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11AP58511 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms