Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 CICP20-201ENST00000443330 2801 ntBASIC13.99□□□□□ -0.17
PER3P56645 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.99□□□□□ -0.17
PER3P56645 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.99□□□□□ -0.17
PER3P56645 AC093433.1-201ENST00000458048 571 ntBASIC13.99□□□□□ -0.17
PER3P56645 FAM86HP-204ENST00000513466 959 ntBASIC13.99□□□□□ -0.17
PER3P56645 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.99□□□□□ -0.17
PER3P56645 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.99□□□□□ -0.17
PER3P56645 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.99□□□□□ -0.17
PER3P56645 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.99□□□□□ -0.17
PER3P56645 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PER3P56645 AC112504.1-201ENST00000623415 1841 ntBASIC13.99□□□□□ -0.17
PER3P56645 AC018892.3-201ENST00000623986 2499 ntBASIC13.99□□□□□ -0.17
PER3P56645 AC010327.5-201ENST00000586923 3061 ntBASIC13.99□□□□□ -0.17
PER3P56645 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PER3P56645 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PER3P56645 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.98□□□□□ -0.17
PER3P56645 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 AC011477.6-201ENST00000604980 1927 ntBASIC13.98□□□□□ -0.17
PER3P56645 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.98□□□□□ -0.17
PER3P56645 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 AL607033.1-201ENST00000623900 1599 ntBASIC13.98□□□□□ -0.17
PER3P56645 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.98□□□□□ -0.17
PER3P56645 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 MIR326-201ENST00000362220 95 ntBASIC13.98□□□□□ -0.17
PER3P56645 ACKR1-201ENST00000368121 1240 ntBASIC13.98□□□□□ -0.17
PER3P56645 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PER3P56645 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.98□□□□□ -0.17
PER3P56645 KRT18P64-201ENST00000434946 1219 ntBASIC13.98□□□□□ -0.17
PER3P56645 AC104306.2-201ENST00000451877 341 ntBASIC13.98□□□□□ -0.17
PER3P56645 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 KRT18P43-201ENST00000469825 1281 ntBASIC13.98□□□□□ -0.17
PER3P56645 RNA5SP423-201ENST00000517127 109 ntBASIC13.98□□□□□ -0.17
PER3P56645 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.98□□□□□ -0.17
PER3P56645 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.98□□□□□ -0.17
PER3P56645 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.98□□□□□ -0.17
PER3P56645 CLUHP6-201ENST00000580789 941 ntBASIC13.98□□□□□ -0.17
PER3P56645 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
PER3P56645 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.98□□□□□ -0.17
PER3P56645 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.98□□□□□ -0.17
PER3P56645 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PER3P56645 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms