Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 ZBED1P1-201ENST00000502364 1930 ntBASIC16.13■□□□□ 0.17
CCL23P55773 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL23P55773 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL23P55773 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL23P55773 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.13■□□□□ 0.17
CCL23P55773 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL23P55773 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL23P55773 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL23P55773 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL23P55773 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL23P55773 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 RNA5SP359-201ENST00000364838 113 ntBASIC16.12■□□□□ 0.17
CCL23P55773 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL23P55773 TSPY25P-201ENST00000429463 745 ntBASIC16.12■□□□□ 0.17
CCL23P55773 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CCL23P55773 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 MIR3180-2-201ENST00000581748 88 ntBASIC16.12■□□□□ 0.17
CCL23P55773 MIR3188-201ENST00000583494 85 ntBASIC16.12■□□□□ 0.17
CCL23P55773 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL23P55773 AC005618.3-201ENST00000624928 458 ntBASIC16.12■□□□□ 0.17
CCL23P55773 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL23P55773 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL23P55773 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL23P55773 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCL23P55773 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL23P55773 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL23P55773 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL23P55773 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.11■□□□□ 0.17
CCL23P55773 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 XBP1P1-201ENST00000436573 652 ntBASIC16.11■□□□□ 0.17
CCL23P55773 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL23P55773 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL23P55773 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL23P55773 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL23P55773 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 AC005357.2-202ENST00000590507 1060 ntBASIC16.11■□□□□ 0.17
CCL23P55773 AC084781.1-201ENST00000613737 656 ntBASIC16.11■□□□□ 0.17
CCL23P55773 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 AC025262.2-201ENST00000623975 1056 ntBASIC16.11■□□□□ 0.17
CCL23P55773 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCL23P55773 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCL23P55773 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL23P55773 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms