Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GTF2A1P52655 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.75□□□□□ -0.05
GTF2A1P52655 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.75□□□□□ -0.05
GTF2A1P52655 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.75□□□□□ -0.05
GTF2A1P52655 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.75□□□□□ -0.05
GTF2A1P52655 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.75□□□□□ -0.05
GTF2A1P52655 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.75□□□□□ -0.05
GTF2A1P52655 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 AC066615.1-201ENST00000640911 628 ntBASIC14.75□□□□□ -0.05
GTF2A1P52655 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GTF2A1P52655 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.75□□□□□ -0.05
GTF2A1P52655 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.75□□□□□ -0.05
GTF2A1P52655 LSINCT5-201ENST00000626215 2647 ntBASIC14.75□□□□□ -0.05
GTF2A1P52655 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GTF2A1P52655 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
GTF2A1P52655 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.74□□□□□ -0.05
GTF2A1P52655 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
GTF2A1P52655 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC14.74□□□□□ -0.05
GTF2A1P52655 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.74□□□□□ -0.05
GTF2A1P52655 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.74□□□□□ -0.05
GTF2A1P52655 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GTF2A1P52655 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 KRT17P6-201ENST00000453795 1220 ntBASIC14.74□□□□□ -0.05
GTF2A1P52655 DUX4L26-201ENST00000489078 1255 ntBASIC14.74□□□□□ -0.05
GTF2A1P52655 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.74□□□□□ -0.05
GTF2A1P52655 Z69720.1-201ENST00000601483 472 ntBASIC14.74□□□□□ -0.05
GTF2A1P52655 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GTF2A1P52655 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GTF2A1P52655 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms