Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.4□□□□□ -0.26
SRP9P49458 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 AC009407.1-201ENST00000568958 598 ntBASIC13.4□□□□□ -0.26
SRP9P49458 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.4□□□□□ -0.26
SRP9P49458 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.4□□□□□ -0.26
SRP9P49458 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.4□□□□□ -0.26
SRP9P49458 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.4□□□□□ -0.26
SRP9P49458 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SRP9P49458 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SRP9P49458 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SRP9P49458 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
SRP9P49458 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.39□□□□□ -0.27
SRP9P49458 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 BCRP1-201ENST00000444246 691 ntBASIC13.39□□□□□ -0.27
SRP9P49458 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.39□□□□□ -0.27
SRP9P49458 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.39□□□□□ -0.27
SRP9P49458 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 AC004461.2-201ENST00000629517 803 ntBASIC13.39□□□□□ -0.27
SRP9P49458 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SRP9P49458 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.39□□□□□ -0.27
SRP9P49458 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SRP9P49458 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SRP9P49458 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SRP9P49458 AL356585.2-201ENST00000625078 2396 ntBASIC13.38□□□□□ -0.27
SRP9P49458 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SRP9P49458 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.38□□□□□ -0.27
SRP9P49458 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.38□□□□□ -0.27
SRP9P49458 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SRP9P49458 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms