Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 AC018665.1-201ENST00000622927 1362 ntBASIC13.23□□□□□ -0.29
CX3CR1P49238 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CX3CR1P49238 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CX3CR1P49238 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 AC134915.1-201ENST00000426461 574 ntBASIC13.23□□□□□ -0.29
CX3CR1P49238 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.23□□□□□ -0.29
CX3CR1P49238 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.23□□□□□ -0.29
CX3CR1P49238 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.23□□□□□ -0.29
CX3CR1P49238 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CX3CR1P49238 AC120045.2-201ENST00000567334 178 ntBASIC13.23□□□□□ -0.29
CX3CR1P49238 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.23□□□□□ -0.29
CX3CR1P49238 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.23□□□□□ -0.29
CX3CR1P49238 AC007431.3-201ENST00000623221 587 ntBASIC13.23□□□□□ -0.29
CX3CR1P49238 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.23□□□□□ -0.29
CX3CR1P49238 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.23□□□□□ -0.29
CX3CR1P49238 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.22□□□□□ -0.29
CX3CR1P49238 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 AL137784.3-201ENST00000623858 2288 ntBASIC13.22□□□□□ -0.29
CX3CR1P49238 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 C1QBPP1-201ENST00000400117 770 ntBASIC13.22□□□□□ -0.29
CX3CR1P49238 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.22□□□□□ -0.29
CX3CR1P49238 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 CYMP-203ENST00000474680 1263 ntBASIC13.22□□□□□ -0.29
CX3CR1P49238 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.22□□□□□ -0.29
CX3CR1P49238 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.22□□□□□ -0.29
CX3CR1P49238 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CR1P49238 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.22□□□□□ -0.29
CX3CR1P49238 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.22□□□□□ -0.29
CX3CR1P49238 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 AC099568.2-201ENST00000609194 695 ntBASIC13.22□□□□□ -0.29
CX3CR1P49238 AC009118.2-201ENST00000613275 655 ntBASIC13.22□□□□□ -0.29
CX3CR1P49238 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CR1P49238 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CR1P49238 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms