Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GDNFP39905 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GDNFP39905 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
GDNFP39905 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
GDNFP39905 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 AZGP1P1-201ENST00000411909 902 ntBASIC13.13□□□□□ -0.31
GDNFP39905 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.13□□□□□ -0.31
GDNFP39905 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.13□□□□□ -0.31
GDNFP39905 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 AC069262.1-201ENST00000539058 672 ntBASIC13.13□□□□□ -0.31
GDNFP39905 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 AC093028.1-201ENST00000622998 982 ntBASIC13.13□□□□□ -0.31
GDNFP39905 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
GDNFP39905 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.13□□□□□ -0.31
GDNFP39905 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GDNFP39905 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
GDNFP39905 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GDNFP39905 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.12□□□□□ -0.31
GDNFP39905 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 SPDYE7P-202ENST00000420373 878 ntBASIC13.12□□□□□ -0.31
GDNFP39905 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.12□□□□□ -0.31
GDNFP39905 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.12□□□□□ -0.31
GDNFP39905 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 AC016397.2-201ENST00000624848 1985 ntBASIC13.12□□□□□ -0.31
GDNFP39905 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
GDNFP39905 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.12□□□□□ -0.31
GDNFP39905 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GDNFP39905 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms