Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.72■□□□□ 0.59
COL15A1P39059 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.72■□□□□ 0.59
COL15A1P39059 MIR6769A-201ENST00000617340 73 ntBASIC18.72■□□□□ 0.59
COL15A1P39059 AC092299.1-201ENST00000632679 757 ntBASIC18.72■□□□□ 0.59
COL15A1P39059 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
COL15A1P39059 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL15A1P39059 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.72■□□□□ 0.59
COL15A1P39059 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
COL15A1P39059 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL15A1P39059 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.71■□□□□ 0.59
COL15A1P39059 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 MIR557-201ENST00000385239 98 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 AL583805.1-201ENST00000391389 531 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.71■□□□□ 0.59
COL15A1P39059 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.71■□□□□ 0.59
COL15A1P39059 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.71■□□□□ 0.59
COL15A1P39059 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.71■□□□□ 0.59
COL15A1P39059 AP000358.1-201ENST00000456260 156 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.71■□□□□ 0.59
COL15A1P39059 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.71■□□□□ 0.59
COL15A1P39059 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.71■□□□□ 0.59
COL15A1P39059 DNM1P30-201ENST00000563586 452 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 LINC01783-202ENST00000614408 828 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 BX284668.2-205ENST00000619677 828 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
COL15A1P39059 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.71■□□□□ 0.59
COL15A1P39059 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
COL15A1P39059 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
COL15A1P39059 PKD1P1-201ENST00000458669 6805 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL15A1P39059 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL15A1P39059 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL15A1P39059 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL15A1P39059 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.71■□□□□ 0.59
COL15A1P39059 AC091951.1-201ENST00000512854 2465 ntBASIC18.71■□□□□ 0.59
COL15A1P39059 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL15A1P39059 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL15A1P39059 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
COL15A1P39059 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 RNA5SP359-201ENST00000364838 113 ntBASIC18.7■□□□□ 0.58
COL15A1P39059 AC079112.1-201ENST00000454972 939 ntBASIC18.7■□□□□ 0.58
COL15A1P39059 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.7■□□□□ 0.58
COL15A1P39059 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.7■□□□□ 0.58
COL15A1P39059 MIR3188-201ENST00000583494 85 ntBASIC18.7■□□□□ 0.58
COL15A1P39059 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.7■□□□□ 0.58
COL15A1P39059 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
COL15A1P39059 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
COL15A1P39059 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.7■□□□□ 0.58
COL15A1P39059 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL15A1P39059 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.7■□□□□ 0.58
COL15A1P39059 TMBIM7P-202ENST00000641474 1516 ntBASIC18.7■□□□□ 0.58
COL15A1P39059 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL15A1P39059 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.7■□□□□ 0.58
COL15A1P39059 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms