Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.05■□□□□ 0.16
HOXC8P31273 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.05■□□□□ 0.16
HOXC8P31273 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 DUX4L50-201ENST00000455245 715 ntBASIC16.05■□□□□ 0.16
HOXC8P31273 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 CHCHD2P9-201ENST00000461726 456 ntBASIC16.05■□□□□ 0.16
HOXC8P31273 AC027237.1-201ENST00000560942 655 ntBASIC16.05■□□□□ 0.16
HOXC8P31273 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HOXC8P31273 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXC8P31273 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HOXC8P31273 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXC8P31273 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 AC006486.2-201ENST00000624246 2199 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HOXC8P31273 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HOXC8P31273 AP000356.3-201ENST00000382243 753 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.04■□□□□ 0.16
HOXC8P31273 AL627422.1-201ENST00000434104 580 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.04■□□□□ 0.16
HOXC8P31273 RPL7P35-201ENST00000446943 740 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 RN7SL530P-201ENST00000485097 298 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.04■□□□□ 0.16
HOXC8P31273 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
HOXC8P31273 AC135983.4-201ENST00000564116 1262 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 MIR4649-201ENST00000582839 64 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 AC025262.2-201ENST00000623975 1056 ntBASIC16.04■□□□□ 0.16
HOXC8P31273 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.04■□□□□ 0.16
HOXC8P31273 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HOXC8P31273 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HOXC8P31273 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.04■□□□□ 0.16
HOXC8P31273 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC8P31273 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.04■□□□□ 0.16
HOXC8P31273 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC8P31273 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
HOXC8P31273 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.03■□□□□ 0.16
HOXC8P31273 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.03■□□□□ 0.16
HOXC8P31273 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 AC018442.1-201ENST00000421439 2061 ntBASIC16.03■□□□□ 0.16
HOXC8P31273 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.03■□□□□ 0.16
HOXC8P31273 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.03■□□□□ 0.16
HOXC8P31273 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HOXC8P31273 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HOXC8P31273 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.03■□□□□ 0.16
HOXC8P31273 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.03■□□□□ 0.16
HOXC8P31273 AC092580.1-201ENST00000433998 658 ntBASIC16.03■□□□□ 0.16
HOXC8P31273 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.03■□□□□ 0.16
HOXC8P31273 MRPL22P1-201ENST00000505398 616 ntBASIC16.03■□□□□ 0.16
HOXC8P31273 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.03■□□□□ 0.16
HOXC8P31273 MIR4750-201ENST00000584564 56 ntBASIC16.03■□□□□ 0.16
HOXC8P31273 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.03■□□□□ 0.16
HOXC8P31273 AC084781.1-201ENST00000613737 656 ntBASIC16.03■□□□□ 0.16
HOXC8P31273 AP001184.1-201ENST00000637936 376 ntBASIC16.03■□□□□ 0.16
HOXC8P31273 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HOXC8P31273 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms