Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 MST1P2-201ENST00000457982 2291 ntBASIC12.88□□□□□ -0.35
CCL1P22362 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.88□□□□□ -0.35
CCL1P22362 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CCL1P22362 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CCL1P22362 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 AL162726.2-201ENST00000438986 1017 ntBASIC12.87□□□□□ -0.35
CCL1P22362 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.87□□□□□ -0.35
CCL1P22362 FO681548.1-201ENST00000455617 1132 ntBASIC12.87□□□□□ -0.35
CCL1P22362 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.87□□□□□ -0.35
CCL1P22362 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 CHCHD2P3-201ENST00000603038 451 ntBASIC12.87□□□□□ -0.35
CCL1P22362 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 AP001002.3-201ENST00000623482 206 ntBASIC12.87□□□□□ -0.35
CCL1P22362 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL1P22362 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 AC007326.2-201ENST00000624224 7579 ntBASIC12.87□□□□□ -0.35
CCL1P22362 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL1P22362 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCL1P22362 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCL1P22362 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL1P22362 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 AC005840.4-201ENST00000541242 2494 ntBASIC12.86□□□□□ -0.35
CCL1P22362 AC007541.1-201ENST00000570282 1469 ntBASIC12.86□□□□□ -0.35
CCL1P22362 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCL1P22362 AC215219.1-201ENST00000400706 1817 ntBASIC12.86□□□□□ -0.35
CCL1P22362 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCL1P22362 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL1P22362 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL1P22362 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL1P22362 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL1P22362 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 PMS2P2-201ENST00000425039 1128 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms