Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
KCNA3P22001 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
KCNA3P22001 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
KCNA3P22001 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
KCNA3P22001 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
KCNA3P22001 LINC02199-201ENST00000506655 2702 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.98■□□□□ 0.47
KCNA3P22001 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 ACTG1P19-201ENST00000418987 1116 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.98■□□□□ 0.47
KCNA3P22001 KRT18P46-201ENST00000435568 1279 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 BRI3P1-201ENST00000440440 378 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 ST13P19-201ENST00000442505 1124 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.98■□□□□ 0.47
KCNA3P22001 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.98■□□□□ 0.47
KCNA3P22001 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 RN7SL277P-201ENST00000481521 288 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 RN7SL582P-201ENST00000491078 279 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 MIR5001-201ENST00000580185 100 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.98■□□□□ 0.47
KCNA3P22001 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.98■□□□□ 0.47
KCNA3P22001 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.98■□□□□ 0.47
KCNA3P22001 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.98■□□□□ 0.47
KCNA3P22001 KRT8P28-201ENST00000433288 1390 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
KCNA3P22001 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
KCNA3P22001 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.98■□□□□ 0.47
KCNA3P22001 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.98■□□□□ 0.47
KCNA3P22001 AD000864.1-201ENST00000624076 2295 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.98■□□□□ 0.47
KCNA3P22001 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KCNA3P22001 ENPP7P8-202ENST00000527856 1345 ntBASIC17.98■□□□□ 0.47
KCNA3P22001 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
KCNA3P22001 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.97■□□□□ 0.47
KCNA3P22001 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA3P22001 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
KCNA3P22001 AL590440.2-201ENST00000641973 1595 ntBASIC17.97■□□□□ 0.47
KCNA3P22001 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.97■□□□□ 0.47
KCNA3P22001 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA3P22001 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.97■□□□□ 0.47
KCNA3P22001 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA3P22001 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
KCNA3P22001 OR8T1P-201ENST00000421347 918 ntBASIC17.97■□□□□ 0.47
KCNA3P22001 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.97■□□□□ 0.47
KCNA3P22001 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.97■□□□□ 0.47
KCNA3P22001 GNG10P1-201ENST00000452289 199 ntBASIC17.97■□□□□ 0.47
KCNA3P22001 RN7SL23P-201ENST00000484055 275 ntBASIC17.97■□□□□ 0.47
KCNA3P22001 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.97■□□□□ 0.47
KCNA3P22001 RN7SL665P-201ENST00000578793 300 ntBASIC17.97■□□□□ 0.47
KCNA3P22001 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA3P22001 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 AC090616.6-203ENST00000579186 1945 ntBASIC17.97■□□□□ 0.47
KCNA3P22001 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KCNA3P22001 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA3P22001 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA3P22001 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.97■□□□□ 0.47
KCNA3P22001 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA3P22001 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
KCNA3P22001 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA3P22001 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms