Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 TSSK5P-201ENST00000423978 907 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AL353779.1-201ENST00000434793 351 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 IGHV3-42-201ENST00000520410 361 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AC004790.1-201ENST00000612686 536 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 MST1P2-201ENST00000457982 2291 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 KRT18P13-201ENST00000400056 1290 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 MIR943-201ENST00000401286 94 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC009477.1-201ENST00000452936 217 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AL158211.3-201ENST00000607385 239 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC008738.7-201ENST00000609744 511 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC004840.1-201ENST00000636359 365 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AL138799.1-201ENST00000448213 1675 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC011474.4-201ENST00000623523 2076 ntBASIC13.97□□□□□ -0.17
TNFRSF1BP20333 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms