Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA1P17096 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGA1P17096 AC006504.5-208ENST00000588784 2401 ntBASIC15.36■□□□□ 0.05
HMGA1P17096 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA1P17096 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA1P17096 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA1P17096 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA1P17096 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA1P17096 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGA1P17096 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HMGA1P17096 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGA1P17096 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 KRT8P21-201ENST00000430398 1491 ntBASIC15.35■□□□□ 0.05
HMGA1P17096 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HMGA1P17096 KRT18P36-201ENST00000411618 1276 ntBASIC15.35■□□□□ 0.05
HMGA1P17096 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 AC007274.2-201ENST00000421675 662 ntBASIC15.35■□□□□ 0.05
HMGA1P17096 AC073150.1-201ENST00000450406 1084 ntBASIC15.35■□□□□ 0.05
HMGA1P17096 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGA1P17096 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGA1P17096 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGA1P17096 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 AC090857.1-201ENST00000527400 390 ntBASIC15.35■□□□□ 0.05
HMGA1P17096 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.35■□□□□ 0.05
HMGA1P17096 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.35■□□□□ 0.05
HMGA1P17096 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.35■□□□□ 0.05
HMGA1P17096 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGA1P17096 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGA1P17096 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGA1P17096 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HMGA1P17096 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA1P17096 AC009093.10-201ENST00000641956 1442 ntBASIC15.34■□□□□ 0.05
HMGA1P17096 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGA1P17096 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA1P17096 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 AC239868.1-201ENST00000369385 493 ntBASIC15.34■□□□□ 0.05
HMGA1P17096 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA1P17096 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGA1P17096 AC092506.1-202ENST00000401022 528 ntBASIC15.34■□□□□ 0.05
HMGA1P17096 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA1P17096 XBP1P1-201ENST00000436573 652 ntBASIC15.34■□□□□ 0.05
HMGA1P17096 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGA1P17096 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA1P17096 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGA1P17096 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.34■□□□□ 0.05
HMGA1P17096 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HMGA1P17096 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.34■□□□□ 0.05
HMGA1P17096 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.34■□□□□ 0.05
HMGA1P17096 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA1P17096 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms