Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CCL4P13236 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCL4P13236 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCL4P13236 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.02□□□□□ -0.16
CCL4P13236 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCL4P13236 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CCL4P13236 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 WASH3P-207ENST00000560956 1394 ntBASIC14.02□□□□□ -0.17
CCL4P13236 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CCL4P13236 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL4P13236 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCL4P13236 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL4P13236 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CCL4P13236 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 AC026316.1-201ENST00000398900 414 ntBASIC14.02□□□□□ -0.17
CCL4P13236 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL4P13236 RPL17P11-201ENST00000417593 544 ntBASIC14.02□□□□□ -0.17
CCL4P13236 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL4P13236 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL4P13236 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL4P13236 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.02□□□□□ -0.17
CCL4P13236 AL109837.1-201ENST00000603272 613 ntBASIC14.02□□□□□ -0.17
CCL4P13236 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CCL4P13236 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL4P13236 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL4P13236 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL4P13236 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL4P13236 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL4P13236 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL4P13236 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCL4P13236 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 TMBIM7P-203ENST00000641617 1718 ntBASIC14.01□□□□□ -0.17
CCL4P13236 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL4P13236 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL4P13236 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL4P13236 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL4P13236 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL4P13236 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 AL627231.1-201ENST00000394467 1125 ntBASIC14.01□□□□□ -0.17
CCL4P13236 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 AC026803.1-201ENST00000569130 274 ntBASIC14.01□□□□□ -0.17
CCL4P13236 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL4P13236 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CCL4P13236 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL4P13236 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL4P13236 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CCL4P13236 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL4P13236 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14□□□□□ -0.17
CCL4P13236 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14□□□□□ -0.17
CCL4P13236 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CCL4P13236 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14□□□□□ -0.17
CCL4P13236 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14□□□□□ -0.17
CCL4P13236 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CCL4P13236 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14□□□□□ -0.17
CCL4P13236 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL4P13236 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms