Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.15■□□□□ 0.66
COL5A2P05997 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.15■□□□□ 0.66
COL5A2P05997 KRT8P2-201ENST00000556193 944 ntBASIC19.15■□□□□ 0.66
COL5A2P05997 TRMT112P3-201ENST00000580149 358 ntBASIC19.15■□□□□ 0.66
COL5A2P05997 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.15■□□□□ 0.66
COL5A2P05997 RPS5-204ENST00000598098 536 ntTSL 2 BASIC19.15■□□□□ 0.66
COL5A2P05997 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 HTR7P1-202ENST00000624664 4411 ntBASIC19.15■□□□□ 0.66
COL5A2P05997 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL5A2P05997 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
COL5A2P05997 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.14■□□□□ 0.66
COL5A2P05997 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL5A2P05997 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
COL5A2P05997 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
COL5A2P05997 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.14■□□□□ 0.65
COL5A2P05997 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COL5A2P05997 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19.14■□□□□ 0.65
COL5A2P05997 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.14■□□□□ 0.65
COL5A2P05997 AC026470.1-201ENST00000478038 846 ntBASIC19.14■□□□□ 0.65
COL5A2P05997 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.14■□□□□ 0.65
COL5A2P05997 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
COL5A2P05997 TREHP1-201ENST00000531328 465 ntBASIC19.14■□□□□ 0.65
COL5A2P05997 NDUFB10P1-201ENST00000567319 521 ntBASIC19.14■□□□□ 0.65
COL5A2P05997 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.14■□□□□ 0.65
COL5A2P05997 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.14■□□□□ 0.65
COL5A2P05997 AC067931.2-201ENST00000623655 2003 ntBASIC19.14■□□□□ 0.65
COL5A2P05997 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 TMBIM7P-203ENST00000641617 1718 ntBASIC19.14■□□□□ 0.65
COL5A2P05997 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL5A2P05997 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.13■□□□□ 0.65
COL5A2P05997 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.13■□□□□ 0.65
COL5A2P05997 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COL5A2P05997 AL118508.1-201ENST00000613502 2345 ntBASIC19.13■□□□□ 0.65
COL5A2P05997 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.13■□□□□ 0.65
COL5A2P05997 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL5A2P05997 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.13■□□□□ 0.65
COL5A2P05997 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 ACE3P-201ENST00000423435 1973 ntBASIC19.13■□□□□ 0.65
COL5A2P05997 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.13■□□□□ 0.65
COL5A2P05997 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.13■□□□□ 0.65
COL5A2P05997 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC19.13■□□□□ 0.65
COL5A2P05997 MT2A-202ENST00000561491 581 ntTSL 2 BASIC19.13■□□□□ 0.65
COL5A2P05997 MIR6746-201ENST00000620971 63 ntBASIC19.13■□□□□ 0.65
COL5A2P05997 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COL5A2P05997 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
COL5A2P05997 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.13■□□□□ 0.65
COL5A2P05997 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL5A2P05997 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.13■□□□□ 0.65
COL5A2P05997 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC19.12■□□□□ 0.65
COL5A2P05997 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
COL5A2P05997 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL5A2P05997 AC136621.1-201ENST00000624017 2304 ntBASIC19.12■□□□□ 0.65
COL5A2P05997 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COL5A2P05997 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC19.12■□□□□ 0.65
COL5A2P05997 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.12■□□□□ 0.65
COL5A2P05997 AC148477.9-201ENST00000623974 539 ntBASIC19.12■□□□□ 0.65
COL5A2P05997 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.12■□□□□ 0.65
COL5A2P05997 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.12■□□□□ 0.65
COL5A2P05997 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms