Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQB2P05538 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 AC079776.1-201ENST00000401540 1152 ntBASIC15.17■□□□□ 0.02
HLA-DQB2P05538 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 AC112492.5-201ENST00000421897 457 ntBASIC15.17■□□□□ 0.02
HLA-DQB2P05538 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 KRT17P8-201ENST00000540749 863 ntBASIC15.17■□□□□ 0.02
HLA-DQB2P05538 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 OR10B1P-201ENST00000601666 907 ntBASIC15.17■□□□□ 0.02
HLA-DQB2P05538 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQB2P05538 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 AC007191.1-201ENST00000623179 2995 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 AL136172.1-201ENST00000598590 1394 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 RN7SKP175-201ENST00000408472 289 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 ARSEP1-201ENST00000420443 635 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 GCOM2-201ENST00000509133 1104 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 AC106886.1-201ENST00000568660 600 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 AC006453.4-201ENST00000636949 1252 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 AP000593.2-201ENST00000542775 1433 ntBASIC15.16■□□□□ 0.02
HLA-DQB2P05538 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms