Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 AL079307.3-201ENST00000556114 283 ntBASIC12.63□□□□□ -0.39
CD74P04233 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.63□□□□□ -0.39
CD74P04233 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.63□□□□□ -0.39
CD74P04233 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 SLC25A6P4-201ENST00000586535 553 ntBASIC12.63□□□□□ -0.39
CD74P04233 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.63□□□□□ -0.39
CD74P04233 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CD74P04233 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 AC114271.1-201ENST00000612689 2813 ntBASIC12.63□□□□□ -0.39
CD74P04233 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 AL139385.1-201ENST00000611744 3272 ntBASIC12.62□□□□□ -0.39
CD74P04233 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.62□□□□□ -0.39
CD74P04233 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 ACTG1P14-201ENST00000446382 1122 ntBASIC12.62□□□□□ -0.39
CD74P04233 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.62□□□□□ -0.39
CD74P04233 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.62□□□□□ -0.39
CD74P04233 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CD74P04233 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 LINC01115-203ENST00000606068 577 ntBASIC12.62□□□□□ -0.39
CD74P04233 AC003101.2-201ENST00000612557 442 ntBASIC12.62□□□□□ -0.39
CD74P04233 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CD74P04233 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD74P04233 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 AC111170.3-201ENST00000624282 2464 ntBASIC12.62□□□□□ -0.39
CD74P04233 HLA-A-201ENST00000376802 1334 ntBASIC12.62□□□□□ -0.39
CD74P04233 KRT8P35-201ENST00000483942 1338 ntBASIC12.62□□□□□ -0.39
CD74P04233 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.62□□□□□ -0.39
CD74P04233 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CD74P04233 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms