Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.32■□□□□ 0.2
VTNP04004 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 AC011742.3-201ENST00000439053 820 ntBASIC16.32■□□□□ 0.2
VTNP04004 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 ALG3P1-201ENST00000508806 1114 ntBASIC16.32■□□□□ 0.2
VTNP04004 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VTNP04004 CHMP4BP1-201ENST00000556017 588 ntBASIC16.32■□□□□ 0.2
VTNP04004 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.32■□□□□ 0.2
VTNP04004 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 MIR3619-201ENST00000579667 83 ntBASIC16.32■□□□□ 0.2
VTNP04004 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.32■□□□□ 0.2
VTNP04004 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 LINC01101-201ENST00000622953 1884 ntBASIC16.32■□□□□ 0.2
VTNP04004 AC022532.1-201ENST00000624563 1728 ntBASIC16.32■□□□□ 0.2
VTNP04004 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.32■□□□□ 0.2
VTNP04004 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 Z98259.2-201ENST00000641583 609 ntBASIC16.32■□□□□ 0.2
VTNP04004 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
VTNP04004 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VTNP04004 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
VTNP04004 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.31■□□□□ 0.2
VTNP04004 LINC00528-201ENST00000600723 2160 ntBASIC16.31■□□□□ 0.2
VTNP04004 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VTNP04004 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
VTNP04004 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.31■□□□□ 0.2
VTNP04004 FAM58BP-201ENST00000439056 645 ntBASIC16.31■□□□□ 0.2
VTNP04004 VDAC1P1-201ENST00000439229 848 ntBASIC16.31■□□□□ 0.2
VTNP04004 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.31■□□□□ 0.2
VTNP04004 PUDPP3-201ENST00000445368 636 ntBASIC16.31■□□□□ 0.2
VTNP04004 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.31■□□□□ 0.2
VTNP04004 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VTNP04004 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.31■□□□□ 0.2
VTNP04004 MARK2P5-201ENST00000507649 634 ntBASIC16.31■□□□□ 0.2
VTNP04004 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
VTNP04004 AL160314.3-201ENST00000556041 767 ntBASIC16.31■□□□□ 0.2
VTNP04004 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.31■□□□□ 0.2
VTNP04004 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.31■□□□□ 0.2
VTNP04004 AC097724.1-201ENST00000609581 426 ntBASIC16.31■□□□□ 0.2
VTNP04004 MIR6720-201ENST00000611664 98 ntBASIC16.31■□□□□ 0.2
VTNP04004 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.31■□□□□ 0.2
VTNP04004 AC027601.3-201ENST00000622907 509 ntBASIC16.31■□□□□ 0.2
VTNP04004 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
VTNP04004 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
VTNP04004 AC136759.1-202ENST00000530858 2194 ntBASIC16.31■□□□□ 0.2
VTNP04004 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.31■□□□□ 0.2
VTNP04004 AGAP7P-201ENST00000582299 2062 ntBASIC16.31■□□□□ 0.2
VTNP04004 AGAP14-201ENST00000624701 2060 ntBASIC16.31■□□□□ 0.2
VTNP04004 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTNP04004 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.3■□□□□ 0.2
VTNP04004 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 AC008132.1-202ENST00000342005 1389 ntBASIC16.3■□□□□ 0.2
VTNP04004 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms