Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.55■□□□□ 0.08
TNRC18O15417 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.55■□□□□ 0.08
TNRC18O15417 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TNRC18O15417 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC15.54■□□□□ 0.08
TNRC18O15417 SRSF9P1-201ENST00000399149 530 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 AL049542.1-201ENST00000430231 278 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 NME6-211ENST00000447314 621 ntTSL 3 BASIC15.54■□□□□ 0.08
TNRC18O15417 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.54■□□□□ 0.08
TNRC18O15417 RN7SL677P-201ENST00000466970 319 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 JPT1-205ENST00000470924 663 ntTSL 5 BASIC15.54■□□□□ 0.08
TNRC18O15417 TBC1D3P6-201ENST00000505954 962 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 PHBP10-201ENST00000416467 784 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 CNN2P1-201ENST00000453616 918 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.54■□□□□ 0.08
TNRC18O15417 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC15.54■□□□□ 0.08
TNRC18O15417 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TNRC18O15417 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.54■□□□□ 0.08
TNRC18O15417 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.54■□□□□ 0.08
TNRC18O15417 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TNRC18O15417 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 SRP9P1-201ENST00000445874 261 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC18O15417 NDUFB10P1-201ENST00000567319 521 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 CCND3P2-201ENST00000579393 537 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC15.54■□□□□ 0.08
TNRC18O15417 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TNRC18O15417 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TNRC18O15417 FZD10-202ENST00000539839 3282 ntBASIC15.54■□□□□ 0.08
TNRC18O15417 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC18O15417 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC15.54■□□□□ 0.08
TNRC18O15417 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 AC092127.1-201ENST00000567093 3455 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.53■□□□□ 0.08
TNRC18O15417 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.53■□□□□ 0.08
TNRC18O15417 MIR632-201ENST00000385193 94 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC15.53■□□□□ 0.08
TNRC18O15417 AP001979.1-201ENST00000529222 751 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TNRC18O15417 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC15.53■□□□□ 0.08
TNRC18O15417 ELOBP2-201ENST00000526184 355 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC15.53■□□□□ 0.08
TNRC18O15417 RN7SL460P-201ENST00000582806 258 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 AC022296.3-201ENST00000608823 403 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.53■□□□□ 0.08
TNRC18O15417 KRT18P45-201ENST00000515347 1333 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 AP001094.4-201ENST00000579008 2176 ntBASIC15.53■□□□□ 0.08
TNRC18O15417 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNRC18O15417 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TNRC18O15417 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TNRC18O15417 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms