Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD2O14647 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD2O14647 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC20.09■□□□□ 0.81
CHD2O14647 AC020904.3-201ENST00000624199 442 ntBASIC20.09■□□□□ 0.81
CHD2O14647 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD2O14647 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD2O14647 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CHD2O14647 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 FKBP4P8-201ENST00000610931 1369 ntBASIC20.08■□□□□ 0.81
CHD2O14647 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.08■□□□□ 0.81
CHD2O14647 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC20.08■□□□□ 0.81
CHD2O14647 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD2O14647 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD2O14647 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHD2O14647 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.08■□□□□ 0.8
CHD2O14647 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD2O14647 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.08■□□□□ 0.8
CHD2O14647 COQ4-204ENST00000608951 781 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD2O14647 HPX-213ENST00000615166 826 ntTSL 5 BASIC20.08■□□□□ 0.8
CHD2O14647 AC091769.1-201ENST00000619576 568 ntBASIC20.08■□□□□ 0.8
CHD2O14647 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHD2O14647 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD2O14647 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD2O14647 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD2O14647 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD2O14647 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD2O14647 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CHD2O14647 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CHD2O14647 ODCP-201ENST00000459650 1639 ntBASIC20.07■□□□□ 0.8
CHD2O14647 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHD2O14647 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHD2O14647 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD2O14647 SNORA57-201ENST00000383870 149 ntBASIC20.07■□□□□ 0.8
CHD2O14647 OR10N1P-201ENST00000392758 869 ntBASIC20.07■□□□□ 0.8
CHD2O14647 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 SERBP1P2-201ENST00000436888 1164 ntBASIC20.07■□□□□ 0.8
CHD2O14647 AC092896.1-201ENST00000465850 380 ntBASIC20.07■□□□□ 0.8
CHD2O14647 AC023906.1-201ENST00000486386 453 ntBASIC20.07■□□□□ 0.8
CHD2O14647 AC087203.1-201ENST00000532111 1181 ntBASIC20.07■□□□□ 0.8
CHD2O14647 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 AC145285.5-201ENST00000562217 361 ntBASIC20.07■□□□□ 0.8
CHD2O14647 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.07■□□□□ 0.8
CHD2O14647 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 AL136982.5-201ENST00000605222 294 ntBASIC20.07■□□□□ 0.8
CHD2O14647 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC20.07■□□□□ 0.8
CHD2O14647 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD2O14647 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD2O14647 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHD2O14647 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD2O14647 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.06■□□□□ 0.8
CHD2O14647 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD2O14647 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD2O14647 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD2O14647 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD2O14647 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD2O14647 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD2O14647 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD2O14647 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CHD2O14647 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHD2O14647 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD2O14647 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms